A first-of-its-kind LMIC-led genomic surveillance and AI intelligence network safeguarding Vietnam, the Philippines, Nepal and Laos from disease threats — 4 to 8 weeks in advance.
From coral reef surveillance to genomic laboratories — our network spans ecosystems and borders to detect threats before they become outbreaks.
SEAPIN is one of the first LMIC-led, multi-country disease intelligence networks to simultaneously address vector-borne diseases, antimicrobial resistance, and emerging pathogen threats across Southeast Asia and South Asia. Proactive genomic surveillance at critical human–animal–environment interfaces feeds into an open-access regional portal linked to WHO GLASS and ASEAN APSED.
Sequencing infrastructure at each partner institution, generating real-time pathogen genome data across the region.
eDNA, wastewater genomics, and mosquito microbiome sequencing to detect threats ecosystem-wide without individual host sampling.
LSTM + XGBoost ensemble models integrate climate, ecology, vector, and genomic data for district-level forecast maps 4–8 weeks ahead.
National MoH co-investigators from Day 1 with a formal Evidence–Action Accountability Mechanism translating data into policy.
Five active threat domains form SEAPIN's detection framework — spanning vector-borne viruses, drug-resistant bacteria, and novel emerging pathogens.
Cross-border serotype and lineage tracking via whole-genome sequencing, vector surveillance, AI-powered hotspot mapping, and seasonal vaccine timing guidance across SEAPIN sentinel sites.
Plasmodium vivax & falciparum genomics, artemisinin drug-resistance gene surveillance, and forest malaria interface mapping across the Greater Mekong Subregion.
Genomic strain typing of E. coli, MRSA, Klebsiella, Pseudomonas, Enterococcus, and Acinetobacter. MCR colistin-resistance tracking via WHO GLASS integration.
eDNA sampling from water bodies, agricultural soil, rice paddies, and wetlands. Shotgun metagenomics profiling AMR gene flow across 12 sentinel sites in the network region.
Deep learning anomaly detection flags unknown sequences before clinical cases emerge. Wastewater and eDNA surveillance provide 14–21 day pre-clinical lead time for novel biological threats.
Six institutions across four countries form the backbone of SEAPIN's surveillance network — each contributing unique genomic, epidemiological, and analytical capabilities.
Consortium Coordinator · AMR Surveillance · Genomic Intelligence
Vector-borne Disease Surveillance · Environmental Genomics
Mekong Corridor Surveillance · Malaria Genomics
AI & Data Science · Outbreak Prediction Modelling
Biostatistics · Epidemiological Modelling · Capacity Building
Conservation Genomics · Wildlife–Pathogen Interface Research
Pioneering One Health scientist spanning conservation genomics, zoonotic disease surveillance, and AMR across Nepal and South Asia. Founder of CMDN, BIOVAC Nepal, and led Nepal Tiger Genome Project.
One Health AMR epidemiologist and ML specialist. Winner of the 2023 US-ASEAN STIC grant. PI of DAAD/RGC BeONE project. YSEALI Women's Leadership Academy fellow.
Veterinary public health expert and diplomate of the Philippine College of Veterinary Epidemiologists. Lead researcher for JEV One Health study. Co-leads Epidemiology & Data Science Division at UPLB.
Epidemiologist and director of the Institute for Health Logistics & Analytics. Focuses on disease surveillance, capacity building, and emergency preparedness with a One Health lens.
Outstanding Young Scientist (NAST Philippines). Expert in molecular detection of tick-borne pathogens. DVM cum laude and PhD from Yamaguchi University, Japan.
Poultry production and medicine specialist with 10+ years as health consultant across East and Southeast Asia. PhD from Osaka Prefecture University, Japan.
Disease ecologist integrating genomics, ML, and field ecology. Research spans HPAI, mosquito-borne disease surveillance, and wildlife disease systems. One Health Tasmania & Antarctica Lead.
Dean with broad One Health expertise, animal health, and food safety. Coordinated ComAcross project with ILRI. PhD from Czech University of Life Sciences.
Wildlife conservation and zoonotic disease expert. Completed 2024 SEAOHUN Fellowship with WCS Vietnam. Integrates One Health principles in veterinary education. Lead researcher for JEV One Health study in Laos.
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